Butte
Butte Creek

Lassen
Blue Lake, Round Corral Reservoir, Ash Creek, Eagle Lake, Clear Creek, Goodrich Creek Lower, Lower & Upper Susan River

Modoc
Annie Lake, Dorris Reservoir, Pit River (South Fork)

MENDOCINO
Cleone Lake

Shasta
Bailey Creek, Baum Lake, Brandy Creek, Lower Clark Creek, Cow Creek North, Clear Creek (Above Whiskeytown Lake), Fall River Pond, Grace Lake, Burney Creek (Lower, Middle, Upper), Hat Creek (Middle & Upper), Hatchet Creek, Iron Canyon Reservoir, Keswick Canal, Kilarc Reservoir, McCloud River, McCumber Reservoir, Montgomery Creek, Nora Lake, North Battle Creek Reservoir, Rock Creek (Below Britton), Whiskytown Lake

Siskiyou
Bear Creek (Upper and Lower), Castle Lake, Cold Creek, Lower Gumboot Lake, Mumbo Lake (Lower, Trinity Divide), McCloud River (Fowlers, Lower Falls), McCloud River (Lakin Dam), Siskiyou Lake, Wagon Creek

Tehama
Battlecreek (South Fork), Battlecreek (North Fork), Deer Creek, Digger Creek, Gurnsey Creek

Trinity
Coffee Creek, Lewiston Lake, Trinity River, Trinity River (East Fork), Trinity River (Stuart Fork)